Home » Guide for obtaining ordinary differential equations from chemical reactions or a Petri net

Guide for obtaining ordinary differential equations from chemical reactions or a Petri net

During the process of familiarizing myself with the concepts of Petri nets and continuous simulations of bio-chemical networks, I wanted to discover the mechanism of deriving the set of ordinary differential equations (ODEs) corresponding to a given set of chemical reactions or the graphical representation of a Petri net. I have summarized my findings in the following guide and published it here such that other people facing the same question can get a quicker answer. Therefore, this guide is intended to be read by “beginners” and not professionals or experts.

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